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Health Outcomes & Biomedical Informatics College of Medicine
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Protiva Rahman

Protiva Rahman,

Research Assistant Professor

Department: MD-HOBI-GENERAL
Business Phone: (352) 627-9467
Business Email: protiva.rahman@ufl.edu

About Protiva Rahman

Dr. Rahman is interested in building tools to democratize data science, with a focus on empowering domain experts in healthcare. Her research spans the disciplines of data science, natural language processing, and human-computer interaction in domains of infectious diseases and cancer. Dr. Rahman’s overarching goal is to bridge the gap between data science and domain experts. To this end, her Ph.D. thesis presented a framework to amplify expertise in clinical data pipelines while her postdoctoral work aimed to automate data extraction from unstructured texts such as EHR notes and biomedical literature. She received her Ph.D. in Computer Science from The Ohio State University in August 2020 and completed her postdoctoral training in Biomedical Informatics at the Vanderbilt University Medical Center.

Related Links:
Website

Teaching Profile

Courses Taught
2024
GMS6803 Data Science for Clinical Research

Research Profile

Open Researcher and Contributor ID (ORCID)

0000-0003-0000-8558

Publications

2024
Prediction of Effectiveness and Toxicities of Immune Checkpoint Inhibitors Using Real-World Patient Data
JCO Clinical Cancer Informatics. (8) [DOI] 10.1200/cci.23.00207.
Publisher’s Site
2023
Accelerated curation of checkpoint inhibitor-induced colitis cases from electronic health records
JAMIA Open. 6(1) [DOI] 10.1093/jamiaopen/ooad017. [PMID] 37012912.
1 citation · PubMed · Publisher’s Site
2022
Semi-Automated Data Curation from Biomedical Literature.
AMIA … Annual Symposium proceedings. AMIA Symposium. 2022:884-891 [PMID] 37128469.
PubMed
2022
Systems Approach to Integrating Preclinical Apolipoprotein E-Knockout Investigations Reveals Novel Etiologic Pathways and Master Atherosclerosis Network in Humans
Arteriosclerosis, Thrombosis, and Vascular Biology. 42(1):35-48 [DOI] 10.1161/atvbaha.121.317071. [PMID] 34758633.
6 citations · PubMed · Publisher’s Site
2020
Amplifying Domain Expertise in Clinical Data Pipelines
JMIR Medical Informatics. 8(11) [DOI] 10.2196/19612. [PMID] 33151150.
7 citations · PubMed · Publisher’s Site
2020
Evaluating interactive data systems
The VLDB Journal. 29(1):119-146 [DOI] 10.1007/s00778-019-00589-2.
Publisher’s Site
2020
Prediction of Antibiotic Susceptibility for Urinary Tract Infection in a Hospital Setting.
Antimicrobial agents and chemotherapy. 64(7) [DOI] 10.1128/AAC.02236-19. [PMID] 32312778.
8 citations · PubMed · Publisher’s Site
2019
Transformer
Proceedings of the 24th International Conference on Intelligent User Interfaces. [DOI] 10.1145/3301275.3302269.
Publisher’s Site
2018
ICARUS: Minimizing Human Effort in Iterative Data Completion.
Proceedings of the VLDB Endowment. International Conference on Very Large Data Bases. 11(13):2263-2276 [PMID] 31179156.
3 citations · PubMed
2018
Penicillin allergy and association with ciprofloxacin coverage in community-onset urinary tract infection
Infection Control & Hospital Epidemiology. 39(9):1127-1128 [DOI] 10.1017/ice.2018.155. [PMID] 30033886.
5 citations · PubMed · Publisher’s Site

Grants

Apr 2024 ACTIVE
All of Us Center for Linkage and Acquisition of Data (CLAD)
Role: Co-Investigator
Funding: UNIV OF NORTH CAROLINA CHAPEL HILL via NATL INST OF HLTH
Oct 2023 – Jul 2024
COVID-19 Electronic Health Data Initiative
Role: Principal Investigator
Funding: TASK FORCE FOR GLOBAL HEALTH via CTRS FOR DISEASE CONTROL AND PREVENTION

Contact Details

Phones:
Business:
(352) 627-9467
Emails:
Business:
protiva.rahman@ufl.edu
Addresses:
Business Mailing:
PO Box 100147
 Gainesville FL 32610
Business Street:
1889 MUSEUM RD STE 7000 FL 7
 GAINESVILLE FL 32611